Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm14723-201ENSMUST00000118686 215 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm25700-201ENSMUST00000177693 110 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm29615-201ENSMUST00000185371 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28937-201ENSMUST00000185413 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28224-201ENSMUST00000186078 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm29001-201ENSMUST00000186177 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28292-201ENSMUST00000186593 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm29400-201ENSMUST00000187208 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28101-201ENSMUST00000187608 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm29076-201ENSMUST00000187689 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28302-201ENSMUST00000187931 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28646-201ENSMUST00000188220 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28662-201ENSMUST00000188446 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28251-201ENSMUST00000188835 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28205-201ENSMUST00000189177 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm29032-201ENSMUST00000189797 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm28695-201ENSMUST00000190300 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm37448-201ENSMUST00000192795 697 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm37318-201ENSMUST00000194325 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm38017-201ENSMUST00000194768 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm37287-201ENSMUST00000195449 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm37793-201ENSMUST00000195548 695 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 AY036118-201ENSMUST00000200021 923 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm44967-201ENSMUST00000207047 631 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps39Q8R5L3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps39Q8R5L3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 194.5 ms