Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Gm43966-201ENSMUST00000203301 612 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.47□□□□□ -0.89
Nup35Q8R4R6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup35Q8R4R6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm12390-201ENSMUST00000117897 397 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm6023-201ENSMUST00000118217 606 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm4986-201ENSMUST00000119731 549 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm18065-201ENSMUST00000221395 526 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Nup35Q8R4R6 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup35Q8R4R6 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms