Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm14071-201ENSMUST00000117817 509 ntBASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm12463-201ENSMUST00000118271 849 ntBASIC10.36□□□□□ -0.75
ShfQ8CG80 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm26047-201ENSMUST00000157308 113 ntBASIC10.36□□□□□ -0.75
ShfQ8CG80 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm26047-202ENSMUST00000198840 115 ntBASIC10.36□□□□□ -0.75
ShfQ8CG80 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
ShfQ8CG80 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ShfQ8CG80 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
ShfQ8CG80 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Btrc-209ENSMUST00000224478 2194 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm12742-201ENSMUST00000117326 410 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm13296-201ENSMUST00000117854 997 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm5616-201ENSMUST00000165252 384 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm8741-201ENSMUST00000174736 384 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm17827-201ENSMUST00000211825 742 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.35□□□□□ -0.75
ShfQ8CG80 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.35□□□□□ -0.75
ShfQ8CG80 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
ShfQ8CG80 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
ShfQ8CG80 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms