Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm18062-201ENSMUST00000208020 547 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm18055-201ENSMUST00000208254 547 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm45865-201ENSMUST00000211815 945 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Cts7-204ENSMUST00000225321 1257 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm25857-201ENSMUST00000082788 129 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.35□□□□□ -0.11
Smc5Q8CG46 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc5Q8CG46 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.34□□□□□ -0.11
Smc5Q8CG46 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.34□□□□□ -0.11
Smc5Q8CG46 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm4157-201ENSMUST00000211647 679 ntBASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.34□□□□□ -0.11
Smc5Q8CG46 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc5Q8CG46 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smc5Q8CG46 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smc5Q8CG46 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC14.33□□□□□ -0.11
Smc5Q8CG46 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.33□□□□□ -0.12
Smc5Q8CG46 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smc5Q8CG46 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms