Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Ccdc28bQ8CEG5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28bQ8CEG5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28bQ8CEG5 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28bQ8CEG5 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc28bQ8CEG5 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Gm12164-201ENSMUST00000121695 551 ntBASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Gm19994-201ENSMUST00000217086 586 ntBASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Gm10254-201ENSMUST00000052888 867 ntBASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccdc28bQ8CEG5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm18893-201ENSMUST00000198416 943 ntBASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.51□□□□□ -0.57
Ccdc28bQ8CEG5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms