Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm9192-201ENSMUST00000183221 985 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm38317-201ENSMUST00000195564 343 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm18056-201ENSMUST00000207670 568 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm18061-201ENSMUST00000208350 562 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm18063-201ENSMUST00000208529 568 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm18052-201ENSMUST00000208750 559 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc87Q8CDL9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gm7722-201ENSMUST00000120646 741 ntBASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc87Q8CDL9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms