Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vps53Q8CCB4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Vps53Q8CCB4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps53Q8CCB4 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.58□□□□□ -0.23
Vps53Q8CCB4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Vps53Q8CCB4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm7851-201ENSMUST00000117574 323 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm15610-201ENSMUST00000120584 195 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm12196-201ENSMUST00000120954 262 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm8194-201ENSMUST00000159783 859 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm17931-201ENSMUST00000208132 634 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.58□□□□□ -0.24
Vps53Q8CCB4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm12164-201ENSMUST00000121695 551 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm37246-201ENSMUST00000192665 835 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm6905-201ENSMUST00000205729 511 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps53Q8CCB4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms