Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim9Q8C7M3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm5369-201ENSMUST00000217499 588 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim9Q8C7M3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm7851-201ENSMUST00000117574 323 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.8□□□□□ -0.36
Trim9Q8C7M3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms