Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Rft1Q8C3B8 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm11930-201ENSMUST00000117788 190 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm17376-201ENSMUST00000166016 84 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm3096-201ENSMUST00000185770 364 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm18304-201ENSMUST00000189162 546 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm6082-201ENSMUST00000215204 454 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Rft1Q8C3B8 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Rgr-203ENSMUST00000225070 4704 ntBASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Rft1Q8C3B8 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms