Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfml3-204ENSMUST00000169286 874 ntBASIC16.36■□□□□ 0.21
Usp47Q8BY87 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gm13384-201ENSMUST00000117166 1344 ntBASIC16.36■□□□□ 0.21
Usp47Q8BY87 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gm37542-201ENSMUST00000192563 2832 ntBASIC16.36■□□□□ 0.21
Usp47Q8BY87 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm14665-201ENSMUST00000122294 557 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Mir7051-201ENSMUST00000184167 73 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm5468-202ENSMUST00000227851 682 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm10263-201ENSMUST00000085163 300 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Gm6655-201ENSMUST00000201932 1309 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.35■□□□□ 0.21
Usp47Q8BY87 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp47Q8BY87 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Gm13937-201ENSMUST00000121000 988 ntBASIC16.34■□□□□ 0.21
Usp47Q8BY87 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Gm24992-201ENSMUST00000157412 130 ntBASIC16.34■□□□□ 0.21
Usp47Q8BY87 Gm17877-201ENSMUST00000192578 814 ntBASIC16.34■□□□□ 0.21
Usp47Q8BY87 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp47Q8BY87 Nudt13-207ENSMUST00000224311 1574 ntBASIC16.33■□□□□ 0.21
Usp47Q8BY87 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Gm45416-201ENSMUST00000209713 2201 ntBASIC16.33■□□□□ 0.21
Usp47Q8BY87 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Usp47Q8BY87 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Gm15617-201ENSMUST00000118973 771 ntBASIC16.33■□□□□ 0.2
Usp47Q8BY87 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Gm8197-202ENSMUST00000193422 934 ntBASIC16.33■□□□□ 0.2
Usp47Q8BY87 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp47Q8BY87 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 206.7 ms