Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.54□□□□□ -0.4
Nop53Q8BK35 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm6114-201ENSMUST00000182472 968 ntBASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm29107-201ENSMUST00000190910 347 ntBASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm44387-201ENSMUST00000196298 145 ntBASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nop53Q8BK35 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm25890-201ENSMUST00000177643 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm22614-201ENSMUST00000178300 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm43553-201ENSMUST00000200900 685 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm13097-201ENSMUST00000210722 397 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm8712-201ENSMUST00000221090 701 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm22042-201ENSMUST00000082989 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm26110-201ENSMUST00000083971 165 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm18719-201ENSMUST00000196696 1413 ntBASIC12.53□□□□□ -0.4
Nop53Q8BK35 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nop53Q8BK35 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms