Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm5419-201ENSMUST00000119301 527 ntBASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm11700-201ENSMUST00000119409 403 ntBASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Mospd4-201ENSMUST00000180618 576 ntBASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim6Q8BGE7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm6114-201ENSMUST00000182472 968 ntBASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim6Q8BGE7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Gm7722-201ENSMUST00000120646 741 ntBASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Gm12164-201ENSMUST00000121695 551 ntBASIC12.36□□□□□ -0.43
Trim6Q8BGE7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim6Q8BGE7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms