Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm30946-201ENSMUST00000198288 724 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm18065-201ENSMUST00000221395 526 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.23□□□□□ -0.29
Ddx55Q6ZPL9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm12389-201ENSMUST00000117696 418 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm11957-201ENSMUST00000118304 779 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm8302-201ENSMUST00000119217 852 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm45085-201ENSMUST00000209100 441 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx55Q6ZPL9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm24328-201ENSMUST00000175104 67 ntBASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm42599-201ENSMUST00000201308 469 ntBASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm9487-201ENSMUST00000216600 472 ntBASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Gm8255-201ENSMUST00000218693 305 ntBASIC13.21□□□□□ -0.29
Ddx55Q6ZPL9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms