Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm8712-201ENSMUST00000221090 701 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Gm6013-201ENSMUST00000212264 699 ntBASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Morn2-202ENSMUST00000227729 656 ntBASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Gm10312-201ENSMUST00000078515 489 ntBASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scaf4Q6PFF0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Scaf4Q6PFF0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Scaf4Q6PFF0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms