Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm44158-201ENSMUST00000203881 505 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm17931-201ENSMUST00000208132 634 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdzrn3Q69ZS0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdzrn3Q69ZS0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Gm16166-201ENSMUST00000118291 787 ntBASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Gm23218-201ENSMUST00000158124 276 ntBASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdzrn3Q69ZS0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdzrn3Q69ZS0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms