Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm19228-201ENSMUST00000214030 717 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm8730-201ENSMUST00000076373 954 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm22341-201ENSMUST00000083775 129 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm6238-201ENSMUST00000120999 465 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm44173-201ENSMUST00000204316 132 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm44236-201ENSMUST00000204492 513 ntBASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.18□□□□□ -0.62
Col12a1Q60847 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col12a1Q60847 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm16165-201ENSMUST00000160140 795 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm9619-201ENSMUST00000211587 762 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.17□□□□□ -0.62
Col12a1Q60847 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col12a1Q60847 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm12774-201ENSMUST00000117881 416 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm32102-201ENSMUST00000196885 241 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Col12a1Q60847 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.16□□□□□ -0.62
Col12a1Q60847 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col12a1Q60847 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms