Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm9072-201ENSMUST00000218390 1514 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37931-201ENSMUST00000194686 2866 ntBASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5d-4Q5R1F6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm15711-201ENSMUST00000118889 535 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm4310-201ENSMUST00000177847 889 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm28937-201ENSMUST00000185413 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm29400-201ENSMUST00000187208 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm28662-201ENSMUST00000188446 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm28251-201ENSMUST00000188835 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37666-201ENSMUST00000194110 866 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37318-201ENSMUST00000194325 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm38117-201ENSMUST00000194653 939 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm38017-201ENSMUST00000194768 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37287-201ENSMUST00000195449 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37793-201ENSMUST00000195548 695 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm6450-201ENSMUST00000200896 574 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav5d-4Q5R1F6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm23949-201ENSMUST00000104027 127 ntBASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav5d-4Q5R1F6 Mir7677-201ENSMUST00000184226 67 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms