Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm18201-201ENSMUST00000174735 875 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm37826-201ENSMUST00000195329 322 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm42816-201ENSMUST00000198433 325 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm18968-201ENSMUST00000221319 862 ntBASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx49Q4FZF3 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm24791-201ENSMUST00000104284 131 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm11244-201ENSMUST00000121243 237 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm22146-201ENSMUST00000157397 288 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.59□□□□□ -0.23
Ddx49Q4FZF3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms