Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.53□□□□□ -0.88
Trim63Q38HM4 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim63Q38HM4 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.52□□□□□ -0.88
Trim63Q38HM4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim63Q38HM4 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm13884-201ENSMUST00000118103 829 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm14921-201ENSMUST00000118643 908 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.52□□□□□ -0.89
Trim63Q38HM4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim63Q38HM4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim63Q38HM4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC9.51□□□□□ -0.89
Trim63Q38HM4 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.51□□□□□ -0.89
Trim63Q38HM4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms