Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.7□□□□□ -0.86
Tff1Q08423 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.7□□□□□ -0.86
Tff1Q08423 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tff1Q08423 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.7□□□□□ -0.86
Tff1Q08423 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.7□□□□□ -0.86
Tff1Q08423 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tff1Q08423 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Tff1Q08423 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm14109-201ENSMUST00000118814 309 ntBASIC9.69□□□□□ -0.86
Tff1Q08423 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.69□□□□□ -0.86
Tff1Q08423 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm18711-201ENSMUST00000199341 750 ntBASIC9.69□□□□□ -0.86
Tff1Q08423 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.69□□□□□ -0.86
Tff1Q08423 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Tff1Q08423 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.69□□□□□ -0.86
Tff1Q08423 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.69□□□□□ -0.86
Tff1Q08423 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tff1Q08423 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Tff1Q08423 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tff1Q08423 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.68□□□□□ -0.86
Tff1Q08423 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Tff1Q08423 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.68□□□□□ -0.86
Tff1Q08423 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Gm20426-201ENSMUST00000173657 440 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Gm25700-201ENSMUST00000177693 110 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.68□□□□□ -0.86
Tff1Q08423 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.68□□□□□ -0.86
Tff1Q08423 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tff1Q08423 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tff1Q08423 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Tff1Q08423 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tff1Q08423 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms