Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm11836-201ENSMUST00000121022 441 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm25951-201ENSMUST00000175330 64 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm3551-201ENSMUST00000190750 664 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ebf1Q07802 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ebf1Q07802 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ebf1Q07802 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.85□□□□□ -0.51
Ebf1Q07802 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.85□□□□□ -0.51
Ebf1Q07802 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ebf1Q07802 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm28388-201ENSMUST00000186262 437 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm17877-201ENSMUST00000192578 814 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm44506-201ENSMUST00000206278 965 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm25517-201ENSMUST00000083865 134 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.84□□□□□ -0.51
Ebf1Q07802 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
Ebf1Q07802 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ebf1Q07802 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ebf1Q07802 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.83□□□□□ -0.52
Ebf1Q07802 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ebf1Q07802 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ebf1Q07802 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms