Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15620-201ENSMUST00000122949 270 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm24809-201ENSMUST00000175318 271 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm18801-201ENSMUST00000186616 536 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm40879-201ENSMUST00000220759 612 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 AC158392.3-201ENSMUST00000224271 1284 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.58□□□□□ -0.08
Smarcc1P97496 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcc1P97496 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcc1P97496 Rubie-203ENSMUST00000227803 2430 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Mir1905-201ENSMUST00000122779 82 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm23694-201ENSMUST00000179335 110 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Mir7051-201ENSMUST00000184167 73 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm42433-201ENSMUST00000196806 940 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm44216-201ENSMUST00000203942 157 ntBASIC14.57□□□□□ -0.08
Smarcc1P97496 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcc1P97496 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcc1P97496 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Mir453-201ENSMUST00000104732 82 ntBASIC14.56□□□□□ -0.08
Smarcc1P97496 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm37852-201ENSMUST00000193027 350 ntBASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm37284-201ENSMUST00000193607 539 ntBASIC14.56□□□□□ -0.08
Smarcc1P97496 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smarcc1P97496 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.56□□□□□ -0.08
Smarcc1P97496 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcc1P97496 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms