Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm12453-201ENSMUST00000121981 331 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm9135-201ENSMUST00000182963 990 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cacna1aP97445 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm16459-201ENSMUST00000121443 686 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm17825-201ENSMUST00000206836 794 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.79□□□□□ -0.68
Cacna1aP97445 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Cacna1aP97445 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cacna1aP97445 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.78□□□□□ -0.68
Cacna1aP97445 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Cacna1aP97445 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cacna1aP97445 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cacna1aP97445 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cacna1aP97445 Gm12663-201ENSMUST00000118481 958 ntBASIC10.77□□□□□ -0.68
Cacna1aP97445 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms