Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smad1P70340 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Smad1P70340 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smad1P70340 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smad1P70340 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Gm14247-201ENSMUST00000120950 237 ntBASIC12.02□□□□□ -0.49
Smad1P70340 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.02□□□□□ -0.49
Smad1P70340 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.02□□□□□ -0.49
Smad1P70340 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.02□□□□□ -0.49
Smad1P70340 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smad1P70340 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smad1P70340 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Smad1P70340 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.01□□□□□ -0.49
Smad1P70340 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.01□□□□□ -0.49
Smad1P70340 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.01□□□□□ -0.49
Smad1P70340 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Gm8566-201ENSMUST00000120174 465 ntBASIC12.01□□□□□ -0.49
Smad1P70340 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.01□□□□□ -0.49
Smad1P70340 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.01□□□□□ -0.49
Smad1P70340 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.01□□□□□ -0.49
Smad1P70340 Gm44551-201ENSMUST00000208804 171 ntBASIC12.01□□□□□ -0.49
Smad1P70340 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.01□□□□□ -0.49
Smad1P70340 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.01□□□□□ -0.49
Smad1P70340 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.01□□□□□ -0.49
Smad1P70340 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.01□□□□□ -0.49
Smad1P70340 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.01□□□□□ -0.49
Smad1P70340 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Smad1P70340 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.01□□□□□ -0.49
Smad1P70340 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smad1P70340 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.01□□□□□ -0.49
Smad1P70340 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Smad1P70340 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smad1P70340 Gm18986-201ENSMUST00000216029 1986 ntBASIC12□□□□□ -0.49
Smad1P70340 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Gm11989-201ENSMUST00000117240 672 ntBASIC12□□□□□ -0.49
Smad1P70340 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12□□□□□ -0.49
Smad1P70340 Gm11362-201ENSMUST00000118838 850 ntBASIC12□□□□□ -0.49
Smad1P70340 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12□□□□□ -0.49
Smad1P70340 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12□□□□□ -0.49
Smad1P70340 Gm43058-201ENSMUST00000197645 625 ntBASIC12□□□□□ -0.49
Smad1P70340 Gm18711-201ENSMUST00000199341 750 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms