Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC18.74■□□□□ 0.59
Cux2P70298 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Gm43117-201ENSMUST00000198531 379 ntBASIC18.74■□□□□ 0.59
Cux2P70298 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC18.74■□□□□ 0.59
Cux2P70298 Mir341-201ENSMUST00000093593 96 ntBASIC18.74■□□□□ 0.59
Cux2P70298 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC18.74■□□□□ 0.59
Cux2P70298 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC18.73■□□□□ 0.59
Cux2P70298 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 AC138329.2-201ENSMUST00000225579 1842 ntBASIC18.73■□□□□ 0.59
Cux2P70298 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
Cux2P70298 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Cux2P70298 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC18.73■□□□□ 0.59
Cux2P70298 CT010447.1-201ENSMUST00000225657 1608 ntBASIC18.73■□□□□ 0.59
Cux2P70298 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.73■□□□□ 0.59
Cux2P70298 Gm14005-209ENSMUST00000224993 1832 ntBASIC18.73■□□□□ 0.59
Cux2P70298 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Cux2P70298 Gm14176-201ENSMUST00000121302 477 ntBASIC18.73■□□□□ 0.59
Cux2P70298 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC18.73■□□□□ 0.59
Cux2P70298 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cux2P70298 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cux2P70298 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cux2P70298 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cux2P70298 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cux2P70298 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cux2P70298 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cux2P70298 Gm6560-201ENSMUST00000198588 1591 ntBASIC18.72■□□□□ 0.59
Cux2P70298 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cux2P70298 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.72■□□□□ 0.59
Cux2P70298 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cux2P70298 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC18.72■□□□□ 0.59
Cux2P70298 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux2P70298 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC18.72■□□□□ 0.59
Cux2P70298 AC154747.3-201ENSMUST00000224471 3470 ntBASIC18.72■□□□□ 0.59
Cux2P70298 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC18.71■□□□□ 0.59
Cux2P70298 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Cux2P70298 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Gm15373-201ENSMUST00000121495 214 ntBASIC18.71■□□□□ 0.59
Cux2P70298 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Gm9701-201ENSMUST00000077976 427 ntBASIC18.71■□□□□ 0.59
Cux2P70298 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.71■□□□□ 0.59
Cux2P70298 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux2P70298 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.7■□□□□ 0.58
Cux2P70298 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Cux2P70298 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux2P70298 Gm37122-201ENSMUST00000195313 1567 ntBASIC18.7■□□□□ 0.58
Cux2P70298 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms