Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm7722-201ENSMUST00000120646 741 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm24845-201ENSMUST00000158034 109 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Mospd4-201ENSMUST00000180618 576 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.36□□□□□ -0.75
Sf3b6P59708 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm38266-201ENSMUST00000194931 421 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm45359-201ENSMUST00000210635 427 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm18935-201ENSMUST00000212692 664 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sf3b6P59708 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.36□□□□□ -0.75
Sf3b6P59708 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sf3b6P59708 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm11793-201ENSMUST00000120433 981 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm14832-201ENSMUST00000121289 322 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm37489-201ENSMUST00000191883 159 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm40332-201ENSMUST00000199847 938 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm45331-201ENSMUST00000209868 554 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 Gm9823-201ENSMUST00000051212 327 ntBASIC10.35□□□□□ -0.75
Sf3b6P59708 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.35□□□□□ -0.75
Sf3b6P59708 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sf3b6P59708 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sf3b6P59708 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sf3b6P59708 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sf3b6P59708 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms