Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm13422-201ENSMUST00000118834 504 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm23582-201ENSMUST00000158530 139 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Zfp419-201ENSMUST00000173446 916 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Gm25872-201ENSMUST00000177784 100 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.34□□□□□ -0.59
Lbx1P52955 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm38145-201ENSMUST00000192319 693 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Gm42751-201ENSMUST00000198065 559 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 BB187690-201ENSMUST00000198619 1176 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.34□□□□□ -0.59
Lbx1P52955 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lbx1P52955 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lbx1P52955 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.34□□□□□ -0.59
Lbx1P52955 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Lbx1P52955 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lbx1P52955 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.34□□□□□ -0.59
Lbx1P52955 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lbx1P52955 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lbx1P52955 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lbx1P52955 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lbx1P52955 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm5419-201ENSMUST00000119301 527 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lbx1P52955 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.33□□□□□ -0.6
Lbx1P52955 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Lbx1P52955 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lbx1P52955 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lbx1P52955 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lbx1P52955 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.33□□□□□ -0.6
Lbx1P52955 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Lbx1P52955 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lbx1P52955 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms