Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vps4bP46467 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Vps4bP46467 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.83□□□□□ -0.52
Vps4bP46467 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vps4bP46467 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vps4bP46467 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm22133-201ENSMUST00000102082 109 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Gm14277-201ENSMUST00000121195 360 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.82□□□□□ -0.52
Vps4bP46467 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Vps4bP46467 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.82□□□□□ -0.52
Vps4bP46467 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.82□□□□□ -0.52
Vps4bP46467 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vps4bP46467 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Vps4bP46467 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Vps4bP46467 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Vps4bP46467 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Vps4bP46467 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm15276-201ENSMUST00000145953 498 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm25890-201ENSMUST00000177643 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Gm22614-201ENSMUST00000178300 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.81□□□□□ -0.52
Vps4bP46467 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm13097-201ENSMUST00000210722 397 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Gm18065-201ENSMUST00000221395 526 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm807-202ENSMUST00000224929 408 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vps4bP46467 Gm22042-201ENSMUST00000082989 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Gm26110-201ENSMUST00000083971 165 ntBASIC11.81□□□□□ -0.52
Vps4bP46467 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms