Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.99□□□□□ -0.49
HttP42859 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Gm13377-201ENSMUST00000137984 683 ntBASIC11.99□□□□□ -0.49
HttP42859 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC11.99□□□□□ -0.49
HttP42859 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
HttP42859 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.99□□□□□ -0.49
HttP42859 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.99□□□□□ -0.49
HttP42859 Gm27833-201ENSMUST00000184285 124 ntBASIC11.99□□□□□ -0.49
HttP42859 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.99□□□□□ -0.49
HttP42859 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC11.99□□□□□ -0.49
HttP42859 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HttP42859 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
HttP42859 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HttP42859 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.98□□□□□ -0.49
HttP42859 Ighv1-8-201ENSMUST00000192236 293 ntBASIC11.98□□□□□ -0.49
HttP42859 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HttP42859 Gm18862-201ENSMUST00000204643 933 ntBASIC11.98□□□□□ -0.49
HttP42859 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.98□□□□□ -0.49
HttP42859 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HttP42859 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.98□□□□□ -0.49
HttP42859 Gm7790-201ENSMUST00000118716 1310 ntBASIC11.98□□□□□ -0.49
HttP42859 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC11.98□□□□□ -0.49
HttP42859 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HttP42859 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Gm13688-201ENSMUST00000121557 608 ntBASIC11.98□□□□□ -0.49
HttP42859 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HttP42859 Gm16288-201ENSMUST00000137940 367 ntBASIC11.98□□□□□ -0.49
HttP42859 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HttP42859 Rce1-203ENSMUST00000224707 1255 ntBASIC11.98□□□□□ -0.49
HttP42859 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.98□□□□□ -0.49
HttP42859 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HttP42859 Mir704-201ENSMUST00000102106 77 ntBASIC11.97□□□□□ -0.49
HttP42859 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.97□□□□□ -0.49
HttP42859 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Gm25514-201ENSMUST00000083860 135 ntBASIC11.97□□□□□ -0.49
HttP42859 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HttP42859 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.97□□□□□ -0.49
HttP42859 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm8754-201ENSMUST00000118391 520 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.97□□□□□ -0.49
HttP42859 Gm13898-201ENSMUST00000141865 610 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm6038-201ENSMUST00000154310 948 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Gm28180-201ENSMUST00000189608 722 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.97□□□□□ -0.49
HttP42859 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11.97□□□□□ -0.49
HttP42859 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC11.97□□□□□ -0.49
HttP42859 Gm28746-201ENSMUST00000187453 380 ntBASIC11.97□□□□□ -0.49
HttP42859 Gm8170-201ENSMUST00000218581 945 ntBASIC11.97□□□□□ -0.49
HttP42859 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.97□□□□□ -0.49
HttP42859 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HttP42859 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.97□□□□□ -0.49
HttP42859 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HttP42859 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms