Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm9369-201ENSMUST00000196009 733 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm44323-201ENSMUST00000198689 129 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm6331-201ENSMUST00000217890 450 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Map1b-203ENSMUST00000223725 2669 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.97□□□□□ -0.49
Cxcl12P40224 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cxcl12P40224 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cxcl12P40224 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm23595-201ENSMUST00000104306 130 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm25569-201ENSMUST00000157175 131 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm6612-201ENSMUST00000170777 395 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cxcl12P40224 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.96□□□□□ -0.49
Cxcl12P40224 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cxcl12P40224 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl12P40224 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl12P40224 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl12P40224 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl12P40224 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Cxcl12P40224 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl12P40224 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl12P40224 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.95□□□□□ -0.5
Cxcl12P40224 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm7238-201ENSMUST00000206467 973 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm44814-201ENSMUST00000207018 434 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Gm18123-201ENSMUST00000210874 822 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl12P40224 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl12P40224 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Cxcl12P40224 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.95□□□□□ -0.5
Cxcl12P40224 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms