Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm16479-201ENSMUST00000121706 932 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.03□□□□□ -0.8
Slc6a1P31648 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm43133-201ENSMUST00000197472 463 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.03□□□□□ -0.8
Slc6a1P31648 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm5781-201ENSMUST00000219792 443 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm24526-201ENSMUST00000082921 158 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.03□□□□□ -0.8
Slc6a1P31648 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Slc6a1P31648 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.02□□□□□ -0.8
Slc6a1P31648 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Slc6a1P31648 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm8805-201ENSMUST00000117848 313 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm7029-201ENSMUST00000173226 450 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Slc6a1P31648 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Slc6a1P31648 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.02□□□□□ -0.81
Slc6a1P31648 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Slc6a1P31648 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Slc6a1P31648 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms