Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gjb1P28230 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Gjb1P28230 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm13286-201ENSMUST00000117750 537 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.98□□□□□ -0.33
Gjb1P28230 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gjb1P28230 Gm6606-201ENSMUST00000193613 947 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Gm2448-201ENSMUST00000207080 559 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Gm2594-201ENSMUST00000214774 742 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.98□□□□□ -0.33
Gjb1P28230 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gjb1P28230 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gjb1P28230 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Gjb1P28230 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gjb1P28230 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Gjb1P28230 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Gm23745-201ENSMUST00000104230 125 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Gm12247-201ENSMUST00000117585 670 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.97□□□□□ -0.33
Gjb1P28230 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Gm27956-201ENSMUST00000175604 260 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Gm8384-201ENSMUST00000190905 704 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.97□□□□□ -0.33
Gjb1P28230 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.97□□□□□ -0.33
Gjb1P28230 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.97□□□□□ -0.33
Gjb1P28230 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.97□□□□□ -0.33
Gjb1P28230 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.97□□□□□ -0.33
Gjb1P28230 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.97□□□□□ -0.33
Gjb1P28230 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gjb1P28230 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gjb1P28230 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gjb1P28230 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Gjb1P28230 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Gjb1P28230 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gjb1P28230 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gjb1P28230 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.96□□□□□ -0.33
Gjb1P28230 Gm24328-201ENSMUST00000175104 67 ntBASIC12.96□□□□□ -0.33
Gjb1P28230 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gjb1P28230 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.96□□□□□ -0.33
Gjb1P28230 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms