Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.09□□□□□ -0.47
H2afxP27661 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
H2afxP27661 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afxP27661 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afxP27661 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Gm14999-201ENSMUST00000121039 624 ntBASIC12.09□□□□□ -0.47
H2afxP27661 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afxP27661 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afxP27661 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afxP27661 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.09□□□□□ -0.47
H2afxP27661 Gm18065-201ENSMUST00000221395 526 ntBASIC12.09□□□□□ -0.47
H2afxP27661 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afxP27661 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC12.09□□□□□ -0.47
H2afxP27661 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afxP27661 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.09□□□□□ -0.47
H2afxP27661 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
H2afxP27661 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afxP27661 Gm4984-201ENSMUST00000115987 360 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
H2afxP27661 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.08□□□□□ -0.48
H2afxP27661 Gm13570-201ENSMUST00000140763 309 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gm3329-201ENSMUST00000159873 556 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.08□□□□□ -0.48
H2afxP27661 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC12.08□□□□□ -0.48
H2afxP27661 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.08□□□□□ -0.48
H2afxP27661 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
H2afxP27661 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afxP27661 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afxP27661 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H2afxP27661 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afxP27661 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afxP27661 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms