Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm2553-201ENSMUST00000215986 605 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd40lgP27548 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cd40lgP27548 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.81□□□□□ -0.68
Cd40lgP27548 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.81□□□□□ -0.68
Cd40lgP27548 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd40lgP27548 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm14208-201ENSMUST00000119645 678 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm11660-201ENSMUST00000120955 412 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.8□□□□□ -0.68
Cd40lgP27548 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm5706-201ENSMUST00000181525 993 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm26448-201ENSMUST00000082446 203 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.8□□□□□ -0.68
Cd40lgP27548 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd40lgP27548 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd40lgP27548 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.79□□□□□ -0.68
Cd40lgP27548 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.79□□□□□ -0.68
Cd40lgP27548 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.79□□□□□ -0.68
Cd40lgP27548 Gm4607-201ENSMUST00000206649 577 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms