Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm18061-201ENSMUST00000208350 562 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 Gm18063-201ENSMUST00000208529 568 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 Gm18052-201ENSMUST00000208750 559 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Cdx1P18111 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Gm24526-201ENSMUST00000082921 158 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Cdx1P18111 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.46□□□□□ -0.9
Cdx1P18111 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Cdx1P18111 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.46□□□□□ -0.9
Cdx1P18111 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cdx1P18111 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cdx1P18111 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Cdx1P18111 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx1P18111 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm15370-201ENSMUST00000117158 253 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Gm4986-201ENSMUST00000119731 549 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Gm16479-201ENSMUST00000121706 932 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.45□□□□□ -0.9
Cdx1P18111 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx1P18111 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm6222-202ENSMUST00000182143 629 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Gm29199-201ENSMUST00000187766 775 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx1P18111 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm6334-201ENSMUST00000207083 228 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm21769-201ENSMUST00000211922 111 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.45□□□□□ -0.9
Cdx1P18111 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms