Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ubr1O70481 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.84□□□□□ -0.03
Ubr1O70481 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr1O70481 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ubr1O70481 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ubr1O70481 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Ubr1O70481 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ubr1O70481 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.83□□□□□ -0.03
Ubr1O70481 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.83□□□□□ -0.03
Ubr1O70481 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.83□□□□□ -0.03
Ubr1O70481 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ubr1O70481 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Ubr1O70481 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ubr1O70481 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.03
Ubr1O70481 Gm18014-201ENSMUST00000183369 817 ntBASIC14.83□□□□□ -0.03
Ubr1O70481 Gm37782-201ENSMUST00000194879 678 ntBASIC14.83□□□□□ -0.03
Ubr1O70481 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Ubr1O70481 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.83□□□□□ -0.03
Ubr1O70481 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.83□□□□□ -0.03
Ubr1O70481 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Ubr1O70481 Gm7589-201ENSMUST00000085631 534 ntBASIC14.83□□□□□ -0.03
Ubr1O70481 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.83□□□□□ -0.04
Ubr1O70481 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ubr1O70481 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ubr1O70481 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Gm11996-201ENSMUST00000117538 915 ntBASIC14.83□□□□□ -0.04
Ubr1O70481 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Snord55-201ENSMUST00000174939 79 ntBASIC14.83□□□□□ -0.04
Ubr1O70481 Gm43778-201ENSMUST00000199438 199 ntBASIC14.83□□□□□ -0.04
Ubr1O70481 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.83□□□□□ -0.04
Ubr1O70481 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.83□□□□□ -0.04
Ubr1O70481 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr1O70481 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.82□□□□□ -0.04
Ubr1O70481 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ubr1O70481 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Ubr1O70481 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23400-201ENSMUST00000174994 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm26463-201ENSMUST00000175065 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm24332-201ENSMUST00000175102 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25959-201ENSMUST00000175112 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm22475-201ENSMUST00000175169 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm22903-201ENSMUST00000175193 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25070-201ENSMUST00000175237 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm24159-201ENSMUST00000175264 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25299-201ENSMUST00000175283 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23798-201ENSMUST00000175560 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23802-201ENSMUST00000175565 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25708-201ENSMUST00000177687 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm24370-201ENSMUST00000178007 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23049-201ENSMUST00000178068 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm28019-201ENSMUST00000178138 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25571-201ENSMUST00000178322 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25355-201ENSMUST00000178456 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm24975-201ENSMUST00000178492 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23189-201ENSMUST00000178954 102 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm25100-201ENSMUST00000179750 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm23064-201ENSMUST00000179866 101 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Ubr1O70481 Gm6606-201ENSMUST00000193613 947 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Gm4903-201ENSMUST00000210462 405 ntBASIC14.82□□□□□ -0.04
Ubr1O70481 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.82□□□□□ -0.04
Ubr1O70481 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr1O70481 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms