Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm13981-201ENSMUST00000122360 447 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm25830-201ENSMUST00000158923 132 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm19013-201ENSMUST00000183895 1222 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm19014-201ENSMUST00000184828 1189 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm9102-201ENSMUST00000219250 465 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm5178-201ENSMUST00000219380 898 ntBASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Mir453-201ENSMUST00000104732 82 ntBASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Gm7589-201ENSMUST00000085631 534 ntBASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Ccdc180J3QNE4 Gm6641-201ENSMUST00000196100 1315 ntBASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm12948-201ENSMUST00000119406 682 ntBASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm14497-201ENSMUST00000119537 580 ntBASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm4753-201ENSMUST00000188327 1255 ntBASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC20.93■□□□□ 0.94
Ccdc180J3QNE4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm5700-201ENSMUST00000191483 989 ntBASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm31274-201ENSMUST00000197356 229 ntBASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc180J3QNE4 Gm43002-201ENSMUST00000200310 155 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms