Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm14165-201ENSMUST00000121456 952 ntBASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Gm15620-201ENSMUST00000122949 270 ntBASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Gm18499-201ENSMUST00000220808 1021 ntBASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcf11G3X9Z4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Mir6941-201ENSMUST00000184711 59 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 AC162932.1-201ENSMUST00000219209 872 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 AC102569.1-201ENSMUST00000221563 685 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Gm14005-210ENSMUST00000225087 1413 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Gm43127-201ENSMUST00000195890 2789 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Gm43727-201ENSMUST00000198021 2647 ntBASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcf11G3X9Z4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm44153-201ENSMUST00000204162 1580 ntBASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm37852-201ENSMUST00000193027 350 ntBASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm6677-201ENSMUST00000195100 441 ntBASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcf11G3X9Z4 Gm44806-201ENSMUST00000205574 2303 ntBASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcf11G3X9Z4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm26272-201ENSMUST00000179241 132 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm42660-201ENSMUST00000197733 947 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm6423-201ENSMUST00000204315 934 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm45085-201ENSMUST00000209100 441 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gm8420-201ENSMUST00000097103 598 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcf11G3X9Z4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms