Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm10807-201ENSMUST00000177134 795 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm17877-201ENSMUST00000192578 814 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm44329-201ENSMUST00000197469 112 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm42599-201ENSMUST00000201308 469 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54bE9PXC0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54bE9PXC0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm16166-201ENSMUST00000118291 787 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm14942-201ENSMUST00000119642 336 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm27390-201ENSMUST00000184516 176 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm9136-201ENSMUST00000193368 454 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm43058-201ENSMUST00000197645 625 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm8574-201ENSMUST00000203207 924 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms