Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm12887B1AVM1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm11591-201ENSMUST00000120063 702 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm28882-201ENSMUST00000185504 314 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm19994-201ENSMUST00000217086 586 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm9996-201ENSMUST00000070359 913 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.38□□□□□ -0.91
Gm12887B1AVM1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm12887B1AVM1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.37□□□□□ -0.91
Gm12887B1AVM1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm12887B1AVM1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms