Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm24066-201ENSMUST00000104515 131 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm25694-201ENSMUST00000175448 282 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm6695-201ENSMUST00000177264 1172 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm22616-201ENSMUST00000179783 100 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm8601-201ENSMUST00000182096 909 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm4953-201ENSMUST00000077309 483 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm4925-202ENSMUST00000168843 1561 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.37□□□□□ -0.91
Chd6A3KFM7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Chd6A3KFM7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm42617-201ENSMUST00000197640 1229 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm8725-201ENSMUST00000221829 1333 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm14156-201ENSMUST00000121538 483 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm6939-201ENSMUST00000122029 864 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm13377-201ENSMUST00000137984 683 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm26943-201ENSMUST00000182295 957 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Mir6396-201ENSMUST00000183603 111 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chd6A3KFM7 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Chd6A3KFM7 Gm2328-201ENSMUST00000193525 535 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 AC159899.1-201ENSMUST00000214024 733 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Id2-203ENSMUST00000222667 958 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 AC154506.2-201ENSMUST00000225481 1276 ntBASIC9.36□□□□□ -0.91
Chd6A3KFM7 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms