Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.14□□□□□ -0.47
Scn1aA2APX8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gm15528-201ENSMUST00000117821 864 ntBASIC12.14□□□□□ -0.47
Scn1aA2APX8 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gm24992-201ENSMUST00000157412 130 ntBASIC12.14□□□□□ -0.47
Scn1aA2APX8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.14□□□□□ -0.47
Scn1aA2APX8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Mir1901-201ENSMUST00000122616 78 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm17877-201ENSMUST00000192578 814 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm4294-201ENSMUST00000105169 614 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.13□□□□□ -0.47
Scn1aA2APX8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1aA2APX8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn1aA2APX8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms