Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm8956-201ENSMUST00000203939 825 ntBASIC10.52□□□□□ -0.73
H2afb3S4R1G7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm6963-201ENSMUST00000147879 379 ntBASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm2991-201ENSMUST00000173338 480 ntBASIC10.51□□□□□ -0.73
H2afb3S4R1G7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm27501-201ENSMUST00000183599 107 ntBASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb3S4R1G7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm14109-201ENSMUST00000118814 309 ntBASIC10.5□□□□□ -0.73
H2afb3S4R1G7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
H2afb3S4R1G7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms