Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sec61a2Q9JLR1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm2260-201ENSMUST00000184965 657 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Sec61a2Q9JLR1 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.52□□□□□ -0.72
Sec61a2Q9JLR1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a2Q9JLR1 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms