Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm14441-201ENSMUST00000121960 540 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Mir8109-201ENSMUST00000184375 117 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm21769-201ENSMUST00000211922 111 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm9996-201ENSMUST00000070359 913 ntBASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lima1Q9ERG0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm11700-201ENSMUST00000119409 403 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm14726-201ENSMUST00000120623 896 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Rprl1-201ENSMUST00000158050 327 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm2991-201ENSMUST00000173338 480 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm18711-201ENSMUST00000199341 750 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm19994-201ENSMUST00000217086 586 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm8712-201ENSMUST00000221090 701 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lima1Q9ERG0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lima1Q9ERG0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Lima1Q9ERG0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lima1Q9ERG0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms