Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm23596-201ENSMUST00000104304 132 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm12165-201ENSMUST00000117047 342 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm12196-201ENSMUST00000120954 262 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm13461-201ENSMUST00000120980 662 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm19353-201ENSMUST00000184561 445 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm28686-201ENSMUST00000187404 609 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm11511-201ENSMUST00000118146 540 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Gm270-201ENSMUST00000223010 976 ntBASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdc40Q9DC48 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.85□□□□□ -0.67
Cdc40Q9DC48 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdc40Q9DC48 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms