Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nop56Q9D6Z1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nop56Q9D6Z1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nop56Q9D6Z1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm11478-201ENSMUST00000117851 599 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm16379-201ENSMUST00000161469 348 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm28975-201ENSMUST00000186412 686 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm8762-201ENSMUST00000193486 339 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nop56Q9D6Z1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm11700-201ENSMUST00000119409 403 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm24548-201ENSMUST00000158650 108 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm28882-201ENSMUST00000185504 314 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nop56Q9D6Z1 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms