Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm12390-201ENSMUST00000117897 397 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm10254-201ENSMUST00000052888 867 ntBASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chaf1bQ9D0N7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm5419-201ENSMUST00000119301 527 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm19994-201ENSMUST00000217086 586 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chaf1bQ9D0N7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chaf1bQ9D0N7 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms