Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.52□□□□□ -0.73
Krt88Q9CPR6 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.52□□□□□ -0.73
Krt88Q9CPR6 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm11960-201ENSMUST00000122068 925 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Krt88Q9CPR6 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Lect2-202ENSMUST00000225183 823 ntBASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Krt88Q9CPR6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms