Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.44□□□□□ -0.58
Trim16Q99PP9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim16Q99PP9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm14130-201ENSMUST00000118417 987 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.43□□□□□ -0.58
Trim16Q99PP9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim16Q99PP9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm13996-201ENSMUST00000118456 430 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm42599-201ENSMUST00000201308 469 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.42□□□□□ -0.58
Trim16Q99PP9 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim16Q99PP9 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms